Gene: csrnp1b ENSDARG00000038429

Description

cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]

Gene Synonyms

DrAXUD1, axud1, csrnp1l, csrnpl, fb73e11, wu:fb73e11, zgc:66340

Location

Chromosome 24: 19,707,609-19,719,240 reverse strand.

GRCz11:CM002908.2

About this gene

This gene has 4 transcripts (splice variants), 199 orthologues, 3 paralogues and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109107.5	csrnp1b-202	1836	566aa	ENSDARP00000098740.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QH67	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000056082.5	csrnp1b-201	1538	433aa	ENSDARP00000056081.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNJ1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000135405.2	csrnp1b-204	808	201aa	ENSDARP00000112890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QDT1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133889.2	csrnp1b-203	399	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: csrnp1b ENSDARG00000038429

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Gene: csrnp1b ENSDARG00000038429

Summary

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