Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TSC22D1 ENSDARG00000038306

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Description

TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]

Location

Chromosome 9: 18,732,505-18,814,737 reverse strand.

GRCz11:CM002893.2

About this gene

This gene has 4 transcripts (splice variants), 177 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131267.3	TSC22D1-204	2896	838aa	ENSDARP00000116421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000143165.3	TSC22D1-202	1688	145aa	ENSDARP00000121300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SZP1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145401.2	TSC22D1-201	1059	133aa	ENSDARP00000122272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1G3	-
ENSDART00000131626.3	TSC22D1-203	827	118aa	ENSDARP00000115165.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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