Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: zgc:113333 ENSDARG00000038242

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Description

zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]

Gene Synonyms

si:ch211-173k16.6

Location

Chromosome 3: 18,740,950-18,756,076 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 3 transcripts (splice variants), 61 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000055766.6	zgc:113333-201	1988	471aa	ENSDARP00000055765.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R042	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145539.2	zgc:113333-203	953	156aa	ENSDARP00000117020.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIN0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145277.2	zgc:113333-202	904	254aa	ENSDARP00000119075.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBN3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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