Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: spata4 ENSDARG00000036189

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Description

spermatogenesis associated 4 [Source:ZFIN;Acc:ZDB-GENE-050417-153]

Gene Synonyms

zgc:111786

Location

Chromosome 14: 36,393,854-36,397,876 reverse strand.

GRCz11:CM002898.2

About this gene

This gene has 2 transcripts (splice variants), 175 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000052562.7	spata4-201	989	224aa	ENSDARP00000052561.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DNI1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185199.1	spata4-202	692	224aa	ENSDARP00000156915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DNI1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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