Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: irx4b ENSDARG00000036051

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Description

iroquois homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-040712-4]

Gene Synonyms

ziro4b

Location

Chromosome 19: 28,114,503-28,262,897 forward strand.

GRCz11:CM002903.2

About this gene

This gene has 5 transcripts (splice variants), 167 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133354.3	irx4b-202	1818	439aa	ENSDARP00000114928.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000191517.1	irx4b-204	3374	439aa	ENSDARP00000149631.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWG1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193909.1	irx4b-205	3154	439aa	ENSDARP00000152204.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWG1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183825.1	irx4b-203	2926	439aa	ENSDARP00000148526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWG1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000052338.3	irx4b-201	2907	439aa	ENSDARP00000052337.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LWG1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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