Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ubtf ENSDARG00000035066

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Description

upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]

Gene Synonyms

si:dz180g5.3, wu:fj38c10

Location

Chromosome 3: 20,041,907-20,063,782 reverse strand.

GRCz11:CM002887.2

About this gene

This gene has 3 transcripts (splice variants), 484 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000056614.8	ubtf-201	4412	735aa	ENSDARP00000056613.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZ83	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000165695.2	ubtf-203	2208	735aa	ENSDARP00000131061.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZ83	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126915.3	ubtf-202	1536	447aa	ENSDARP00000106402.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL42	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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