Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: lingo1a ENSDARG00000034165

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Description

leucine rich repeat and Ig domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-080327-16]

Gene Synonyms

sc:d0342

Location

Chromosome 25: 7,229,046-7,230,905 forward strand.

GRCz11:CM002909.2

About this gene

This gene has 2 transcripts (splice variants), 190 orthologues and 34 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149965.2	lingo1a-202	1860	619aa	ENSDARP00000124225.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4D7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000041820.6	lingo1a-201	1848	615aa	ENSDARP00000041819.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJ67	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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