Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: tm7sf2 ENSDARG00000032816

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Description

transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19]

Gene Synonyms

zgc:103611

Location

Chromosome 10: 26,972,755-26,978,376 forward strand.

GRCz11:CM002894.2

About this gene

This gene has 4 transcripts (splice variants), 180 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000042162.8	tm7sf2-201	1601	421aa	ENSDARP00000042161.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8Y4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186210.1	tm7sf2-204	1281	421aa	ENSDARP00000144985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8Y4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143162.2	tm7sf2-202	1050	335aa	ENSDARP00000115191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHB5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147302.2	tm7sf2-203	570	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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