Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: SOX7 ENSDARG00000030125

.

Description

SRY-box transcription factor 7 [Source:ZFIN;Acc:ZDB-GENE-040109-4]

Location

Chromosome 20: 19,066,596-19,080,593 forward strand.

GRCz11:CM002904.2

About this gene

This gene has 3 transcripts (splice variants), 201 orthologues, 27 paralogues and is associated with 13 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000181529.1	SOX7-202	5130	390aa	ENSDARP00000147155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TEN5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130271.4	SOX7-201	2567	390aa	ENSDARP00000108471.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TEN5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000192086.1	SOX7-203	2386	390aa	ENSDARP00000146439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TEN5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.