Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: phyhd1 ENSDARG00000029905

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Description

phytanoyl-CoA dioxygenase domain containing 1 [Source:NCBI gene;Acc:492804]

Gene Synonyms

zgc:101639

Location

Chromosome 21: 4,508,959-4,525,080 forward strand.

GRCz11:CM002905.2

About this gene

This gene has 4 transcripts (splice variants) and 196 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000147187.3	phyhd1-203	1452	291aa	ENSDARP00000123099.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3U0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000025612.6	phyhd1-201	1341	291aa	ENSDARP00000015072.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U3U0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140432.4	phyhd1-202	1031	256aa	ENSDARP00000124422.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W3C5	-
ENSDART00000148910.3	phyhd1-204	836	204aa	ENSDARP00000124739.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2G4	-

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Summary

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