Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HBP1 ENSDARG00000028517

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Description

HMG-box transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-414]

Location

Chromosome 25: 3,449,959-3,470,910 reverse strand.

GRCz11:CM002909.2

About this gene

This gene has 3 transcripts (splice variants) and 210 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000029067.9	HBP1-202	1609	494aa	ENSDARP00000039092.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186738.1	HBP1-201	3403	481aa	ENSDARP00000148354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000186737.1	HBP1-203	1609	481aa	ENSDARP00000152088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

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Summary

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