Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: stxbp6l ENSDARG00000028354

.

Description

syntaxin binding protein 6 (amisyn), like [Source:ZFIN;Acc:ZDB-GENE-040724-16]

Gene Synonyms

si:dkey-29m11.7, si:dkey-63j12.1, zgc:110123

Location

Chromosome 20: 9,828,769-9,848,953 forward strand.

GRCz11:CM002904.2

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080691.6	stxbp6l-202	2515	278aa	ENSDARP00000075137.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5VSD0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000160480.3	stxbp6l-203	3376	279aa	ENSDARP00000138234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IU85	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000053844.7	stxbp6l-201	783	144aa	ENSDARP00000053843.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5VSC9	-

.

Summary

.

.