Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SMAD1 ENSDARG00000027199

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Description

SMAD family member 1 [Source:ZFIN;Acc:ZDB-GENE-991119-8]

Location

Chromosome 1: 35,896,488-35,929,143 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 4 transcripts (splice variants), 214 orthologues, 12 paralogues and is associated with 31 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000033566.8	SMAD1-201	3022	472aa	ENSDARP00000030150.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PQZ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181541.1	SMAD1-203	3813	472aa	ENSDARP00000147187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PQZ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184424.1	SMAD1-202	3589	472aa	ENSDARP00000154860.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5PQZ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185002.1	SMAD1-204	3383	340aa	ENSDARP00000154401.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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