Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: CLINT1 ENSDARG00000025535

.

Description

clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]

Location

Chromosome 14: 35,279,343-35,390,283 forward strand.

GRCz11:CM002898.2

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues, 7 paralogues and is associated with 43 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000144702.3	CLINT1-201	3401	633aa	ENSDARP00000114046.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187750.1	CLINT1-204	5342	644aa	ENSDARP00000155381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000169712.2	CLINT1-202	1673	94aa	ENSDARP00000129957.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000143818.2	CLINT1-203	742	115aa	ENSDARP00000142283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

.

Summary

.

.