Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SIM1 ENSDARG00000023316

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Description

SIM bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020829-1]

Location

Chromosome 16: 1,465,624-1,503,023 reverse strand.

GRCz11:CM002900.2

About this gene

This gene has 2 transcripts (splice variants), 206 orthologues, 13 paralogues and is associated with 35 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000036348.6	SIM1-201	2655	745aa	ENSDARP00000033085.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187189.1	SIM1-202	7344	745aa	ENSDARP00000151913.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMF7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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