Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: GTF2IRD1 ENSDARG00000022203

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Description

GTF2I repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-010328-18]

Location

Chromosome 5: 59,494,079-59,550,943 forward strand.

GRCz11:CM002889.2

About this gene

This gene has 3 transcripts (splice variants), 195 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000148727.3	GTF2IRD1-201	5229	982aa	ENSDARP00000123826.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189341.1	GTF2IRD1-203	351	116aa	ENSDARP00000146888.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000149216.2	GTF2IRD1-202	535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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