Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: smad9 ENSDARG00000021938

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Description

SMAD family member 9 [Source:NCBI gene (formerly Entrezgene);Acc:445564]

Location

Chromosome 10: 34,960,751-35,002,459 reverse strand.

GRCz11:CM002894.2

About this gene

This gene has 6 transcripts (splice variants), 50 orthologues, 12 paralogues and is associated with 15 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170625.3	smad9-205	2691	466aa	ENSDARP00000131023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXZ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000087114.7	smad9-201	5365	330aa	ENSDARP00000081548.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1NAE9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132823.3	smad9-202	2359	466aa	ENSDARP00000117800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXZ9	-
ENSDART00000186108.1	smad9-206	2291	466aa	ENSDARP00000148074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXZ9	-
ENSDART00000145509.2	smad9-204	917	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138281.2	smad9-203	526	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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