Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: spata6 ENSDARG00000021115

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Description

spermatogenesis associated 6 [Source:ZFIN;Acc:ZDB-GENE-050417-351]

Gene Synonyms

zgc:110309

Location

Chromosome 8: 15,287,424-15,305,528 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 3 transcripts (splice variants), 59 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134794.3	spata6-201	1865	455aa	ENSDARP00000114482.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000140867.2	spata6-203	576	111aa	ENSDARP00000118790.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHP6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000137923.2	spata6-202	747	53aa	ENSDARP00000117721.1	Nonsense mediated decay	E9QDR7	-

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Summary

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