Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: znf330 ENSDARG00000020494

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Description

zinc finger protein 330 [Source:ZFIN;Acc:ZDB-GENE-040426-2697]

Gene Synonyms

hm:zeh1201, zgc:56308, zgc:86920

Location

Chromosome 1: 53,266,504-53,277,660 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 5 transcripts (splice variants) and 215 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000014232.8	znf330-201	1916	320aa	ENSDARP00000006732.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6H7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150352.3	znf330-204	746	196aa	ENSDARP00000125454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WF23	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000131520.3	znf330-202	736	224aa	ENSDARP00000120996.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A6H6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000150579.2	znf330-205	458	137aa	ENSDARP00000125509.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0WF78	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000143294.2	znf330-203	637	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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