Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: clcn5a ENSDARG00000019693

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Description

chloride channel, voltage-sensitive 5a [Source:ZFIN;Acc:ZDB-GENE-091113-15]

Gene Synonyms

si:dkey-22f5.8

Location

Chromosome 21: 30,662,263-30,696,595 forward strand.

GRCz11:CM002905.2

About this gene

This gene has 3 transcripts (splice variants), 162 orthologues and 11 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000154758.3	clcn5a-203	7443	811aa	ENSDARP00000128608.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEF7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000138664.4	clcn5a-201	2636	784aa	ENSDARP00000114019.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXU8	-
ENSDART00000144652.2	clcn5a-202	2390	720aa	ENSDARP00000117335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QE68	-

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Summary

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