Gene: npnta ENSDARG00000018721

Description

nephronectin a [Source:ZFIN;Acc:ZDB-GENE-090312-201]

Gene Synonyms

npnt, si:ch211-202n8.2

Location

Chromosome 1: 50,085,440-50,188,006 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 5 transcripts (splice variants), 205 orthologues, 4 paralogues and is associated with 19 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000018469.10	npnta-201	2441	605aa	ENSDARP00000020901.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5G4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000158988.2	npnta-204	1907	633aa	ENSDARP00000139806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2DL88	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000165973.2	npnta-205	1856	616aa	ENSDARP00000132626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H2DL87	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000134988.2	npnta-202	431	87aa	ENSDARP00000122290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5G5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135780.2	npnta-203	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Gene: npnta ENSDARG00000018721

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Gene: npnta ENSDARG00000018721

Summary

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