Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: npnta ENSDARG00000018721

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Description

nephronectin a [Source:NCBI gene (formerly Entrezgene);Acc:563273]

Location

Chromosome 1: 50,085,440-50,188,006 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 5 transcripts (splice variants), 206 orthologues, 4 paralogues and is associated with 28 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000018469.10	npnta-201	2441	605aa	ENSDARP00000020901.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A5G4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000158988.2	npnta-204	1907	633aa	ENSDARP00000139806.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000165973.2	npnta-205	1856	616aa	ENSDARP00000132626.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134988.2	npnta-202	431	87aa	ENSDARP00000122290.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135780.2	npnta-203	547	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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