Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: lrrc40 ENSDARG00000017708

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Description

leucine rich repeat containing 40 [Source:NCBI gene;Acc:334130]

Gene Synonyms

fi33a12, wu:fi33a12, zgc:63729

Location

Chromosome 6: 30,113,750-30,122,554 forward strand.

GRCz11:CM002890.2

About this gene

This gene has 3 transcripts (splice variants), 204 orthologues and 32 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000022586.10	lrrc40-201	2217	601aa	ENSDARP00000016699.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1REP7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144391.2	lrrc40-203	916	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000140921.2	lrrc40-202	850	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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