Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: phf20l1 ENSDARG00000017427

.

Description

PHD finger protein 20 like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5837]

Gene Synonyms

fi20g04, si:dkey-97i18.2, wu:fi20g04

Location

Chromosome 16: 31,601,181-31,622,805 reverse strand.

GRCz11:CM002900.2

About this gene

This gene has 3 transcripts (splice variants), 170 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000002930.10	phf20l1-201	4381	1116aa	ENSDARP00000022161.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2Q3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000176939.2	phf20l1-203	2967	988aa	ENSDARP00000144538.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YBF2	-
ENSDART00000137311.2	phf20l1-202	838	209aa	ENSDARP00000118885.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHS8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

.

Summary

.

.