Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ssrp1b ENSDARG00000016994

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Description

structure specific recognition protein 1 [Source:HGNC Symbol;Acc:HGNC:11327]

Location

Chromosome 1: 44,710,955-44,737,931 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 4 transcripts (splice variants), 149 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000131296.4	ssrp1b-202	2621	703aa	ENSDARP00000118787.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6NLJ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193481.1	ssrp1b-204	2097	698aa	ENSDARP00000150999.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000003895.9	ssrp1b-201	2052	683aa	ENSDARP00000014032.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000142187.2	ssrp1b-203	1687	533aa	ENSDARP00000115037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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