Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: irf9 ENSDARG00000016457

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Description

interferon regulatory factor 9 [Source:ZFIN;Acc:ZDB-GENE-040912-165]

Location

Chromosome 12: 13,282,797-13,306,883 forward strand.

GRCz11:CM002896.2

About this gene

This gene has 3 transcripts (splice variants), 192 orthologues and 12 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137757.3	irf9-201	1767	428aa	ENSDARP00000123550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2B248	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152397.3	irf9-202	538	167aa	ENSDARP00000126686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152751.3	irf9-203	614	75aa	ENSDARP00000127044.1	Nonsense mediated decay	-	-

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Summary

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