Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: CHAT ENSDARG00000015854

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Description

choline O-acetyltransferase a [Source:ZFIN;Acc:ZDB-GENE-080102-2]

Location

Chromosome 13: 29,406,814-29,421,331 reverse strand.

GRCz11:CM002897.2

About this gene

This gene has 2 transcripts (splice variants), 182 orthologues, 10 paralogues and is associated with 26 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000024225.7	CHAT-202	4523	637aa	ENSDARP00000025508.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q9G1 B2ZGJ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150228.3	CHAT-201	2105	637aa	ENSDARP00000125038.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q9G1 B2ZGJ1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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