Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: rab3c ENSDARG00000014462

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Description

RAB3C, member RAS onco family [Source:NCBI gene (formerly Entrezgene);Acc:436803]

Location

Chromosome 8: 17,055,292-17,067,364 reverse strand.

GRCz11:CM002892.2

About this gene

This gene has 2 transcripts (splice variants), 207 orthologues and 88 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000132687.2	rab3c-201	1282	224aa	ENSDARP00000114513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8WHV3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000185313.1	rab3c-202	1492	218aa	ENSDARP00000153031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGH8	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,

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Summary

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