Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: zgc:86598 ENSDARG00000014222

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Description

zgc:86598 [Source:ZFIN;Acc:ZDB-GENE-040625-181]

Gene Synonyms

im:6891713, si:ch211-133n4.5

Location

Chromosome 19: 3,135,271-3,234,924 forward strand.

GRCz11:CM002903.2

About this gene

This gene has 5 transcripts (splice variants), 36 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020344.10	zgc:86598-201	1691	393aa	ENSDARP00000024748.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQV0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193144.1	zgc:86598-205	3783	393aa	ENSDARP00000147261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQV0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181288.1	zgc:86598-204	1488	393aa	ENSDARP00000149801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6IQV0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000125504.4	zgc:86598-202	662	105aa	ENSDARP00000108424.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R0Q0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151301.3	zgc:86598-203	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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