Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sim1b ENSDARG00000013789

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Description

SIM bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041210-5]

Location

Chromosome 4: 929,557-948,842 reverse strand.

GRCz11:CM002888.2

About this gene

This gene has 2 transcripts (splice variants), 8 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023483.7	sim1b-201	1761	586aa	ENSDARP00000003984.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C1JIE2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141639.2	sim1b-202	816	74aa	ENSDARP00000122451.1	Nonsense mediated decay	-	-

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Summary

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