Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: scml2 ENSDARG00000012949

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Description

Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]

Gene Synonyms

si:dkey-163f14.1, zmp:0000000543

Location

Chromosome 11: 30,106,182-30,158,609 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 5 transcripts (splice variants), 219 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000156121.3	scml2-203	3807	720aa	ENSDARP00000129241.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172106.2	scml2-205	2851	457aa	ENSDARP00000133933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IIV3	-
ENSDART00000006669.8	scml2-201	2708	720aa	ENSDARP00000016700.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RDU3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155278.2	scml2-202	289	54aa	ENSDARP00000129583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WH72	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000156196.2	scml2-204	361	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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