Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: foxn1 ENSDARG00000011879

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Description

forkhead box N1 [Source:ZFIN;Acc:ZDB-GENE-021008-1]

Location

Chromosome 15: 28,129,683-28,161,224 reverse strand.

GRCz11:CM002899.2

About this gene

This gene has 2 transcripts (splice variants), 189 orthologues, 53 paralogues and is associated with 10 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000026567.6	foxn1-201	2718	565aa	ENSDARP00000005855.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9K2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174540.2	foxn1-202	2047	565aa	ENSDARP00000143366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R9K2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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