Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: LMO3 ENSDARG00000008720

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Description

LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]

Location

Chromosome 4: 12,612,145-12,679,293 forward strand.

GRCz11:CM002888.2

About this gene

This gene has 5 transcripts (splice variants), 204 orthologues and 31 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112860.3	LMO3-204	883	167aa	ENSDARP00000098627.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R1F5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000003583.8	LMO3-202	2069	145aa	ENSDARP00000015268.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503U0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181201.1	LMO3-205	1241	145aa	ENSDARP00000152478.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q503U0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134362.3	LMO3-203	807	81aa	ENSDARP00000122563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133767.2	LMO3-201	340	38aa	ENSDARP00000119444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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