Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: atp11a ENSDARG00000008413

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Description

ATPase phospholipid transporting 11A [Source:ZFIN;Acc:ZDB-GENE-090311-52]

Gene Synonyms

si:dkey-251i8.1

Location

Chromosome 1: 46,263,473-46,401,385 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 5 transcripts (splice variants), 276 orthologues and 17 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150029.3	atp11a-204	10460	1177aa	ENSDARP00000124793.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2B0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000193233.1	atp11a-205	3456	1151aa	ENSDARP00000156520.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RZA5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000145117.2	atp11a-203	3375	1124aa	ENSDARP00000115894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZDE2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000040284.8	atp11a-201	1917	638aa	ENSDARP00000040283.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q612	-
ENSDART00000132948.2	atp11a-202	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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