Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: pax1a ENSDARG00000008203

.

Description

paired box 1a [Source:NCBI gene (formerly Entrezgene);Acc:564359]

Location

Chromosome 17: 42,274,240-42,278,340 forward strand.

GRCz11:CM002901.2

About this gene

This gene has 2 transcripts (splice variants), 194 orthologues, 56 paralogues and is associated with 6 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020156.8	pax1a-201	1601	359aa	ENSDARP00000023546.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T8Y5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000134377.3	pax1a-202	1401	354aa	ENSDARP00000116456.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1NCV8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

.

Summary

.

.