Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SOX1 ENSDARG00000008131

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Description

SRY-box transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-060322-5]

Location

Chromosome 1: 46,194,333-46,196,107 forward strand.

GRCz11:CM002885.2

About this gene

This gene has 1 transcript (splice variant), 74 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000010894.8	SOX1-201	1775	340aa	ENSDARP00000026510.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q2Z1R2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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