Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: sash1a ENSDARG00000007179

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Description

SAM and SH3 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9960]

Gene Synonyms

fi33a01, ik:tdsubc_2e1, si:dkey-264g21.1, tdsubc_2e1, wu:fi33a01, xx:tdsubc_2e1

Location

Chromosome 20: 31,428,819-31,743,817 reverse strand.

GRCz11:CM002904.2

About this gene

This gene has 5 transcripts (splice variants), 201 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000046841.9	sash1a-201	7137	1192aa	ENSDARP00000046840.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZ33	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000137679.4	sash1a-203	3742	876aa	ENSDARP00000125862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ISH9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000153193.3	sash1a-204	780	200aa	ENSDARP00000127293.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAM5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153437.2	sash1a-205	718	182aa	ENSDARP00000127229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAG1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000087405.6	sash1a-202	495	164aa	ENSDARP00000081839.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R087	-

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Summary

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