Gene: prdm5 ENSDARG00000006288

Description

PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]

Gene Synonyms

un-named hi61, unm hi61

Location

GRCz11:CM002907.2

About this gene

This gene has 2 transcripts (splice variants), 203 orthologues, 67 paralogues and is associated with 19 phenotypes.

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127443.4	prdm5-201	3185	634aa	ENSDARP00000106969.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q8J8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000191312.1	prdm5-202	2302	632aa	ENSDARP00000153711.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DRP9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary