Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: lhfpl6 ENSDARG00000004363

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Description

LHFPL tetraspan subfamily member 6 [Source:ZFIN;Acc:ZDB-GENE-041212-82]

Location

Chromosome 10: 31,938,796-32,041,846 forward strand.

GRCz11:CM002894.2

About this gene

This gene has 3 transcripts (splice variants), 162 orthologues and 9 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000019416.5	lhfpl6-201	2122	200aa	ENSDARP00000007599.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GTL3 Q5PRC1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182579.1	lhfpl6-202	5928	200aa	ENSDARP00000149721.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GTL3 Q5PRC1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000185634.1	lhfpl6-203	636	200aa	ENSDARP00000147943.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GTL3 Q5PRC1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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