Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: psma5 ENSDARG00000003526

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Description

proteasome 20S subunit alpha 5 [Source:ZFIN;Acc:ZDB-GENE-040625-96]

Gene Synonyms

zgc:86851

Location

Chromosome 11: 36,342,997-36,350,993 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 3 transcripts (splice variants), 211 orthologues and 23 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020655.7	psma5-201	1131	241aa	ENSDARP00000009133.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TGV6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000141477.3	psma5-202	861	240aa	ENSDARP00000120863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIF2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000146495.2	psma5-203	761	195aa	ENSDARP00000113355.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFZ7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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