Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: rabif ENSDARG00000002690

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Description

RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]

Gene Synonyms

wu:fc54e04, zgc:92821

Location

Chromosome 11: 24,815,667-24,817,637 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 4 transcripts (splice variants) and 186 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000115356.4	rabif-201	1062	132aa	ENSDARP00000102249.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000141730.3	rabif-202	879	163aa	ENSDARP00000122975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QVW4	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000146838.2	rabif-204	793	145aa	ENSDARP00000117655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WUR4	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000142327.2	rabif-203	557	132aa	ENSDARP00000121226.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DGQ2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Summary

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