Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: ptpra ENSCMIG00000012117

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Description

protein tyrosine phosphatase receptor type A [Source:ZFIN;Acc:ZDB-GENE-020107-1]

Location

Primary_assembly KI635913.1: 2,540,160-2,630,465 reverse strand.

About this gene

This gene has 9 transcripts (splice variants), 203 orthologues and 41 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCMIT00000029654.1	ptpra-202	3828	716aa	ENSCMIP00000029189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4W3IG16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCMIT00000029342.1	ptpra-201	4083	465aa	ENSCMIP00000028881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4W3IN12	-
ENSCMIT00000029679.1	ptpra-207	3762	694aa	ENSCMIP00000029214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4W3IG43	-
ENSCMIT00000029675.1	ptpra-206	3723	681aa	ENSCMIP00000029210.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4W3J9W6	-
ENSCMIT00000029666.1	ptpra-203	3717	679aa	ENSCMIP00000029201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4W3INY2	-
ENSCMIT00000029671.1	ptpra-205	3705	675aa	ENSCMIP00000029206.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4W3INY7	-
ENSCMIT00000029668.1	ptpra-204	3690	670aa	ENSCMIP00000029203.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4W3IS78	-
ENSCMIT00000029680.1	ptpra-208	3651	657aa	ENSCMIP00000029216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4W3INZ7	-
ENSCMIT00000029685.1	ptpra-209	2049	682aa	ENSCMIP00000029220.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4W3J9X7	-

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Summary

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