Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: rpap1 ENSCLMG00005018162

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Description

RNA polymerase II associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-090914-1]

Location

Primary_assembly 22: 11,954,460-11,971,924 reverse strand.

fCycLum1.pri:CM020135.1

About this gene

This gene has 4 transcripts (splice variants) and 197 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCLMT00005039820.1	rpap1-201	4502	1485aa	ENSCLMP00005038347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C3A7X0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCLMT00005039821.1	rpap1-202	4280	1411aa	ENSCLMP00005038348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C3A8P8	-
ENSCLMT00005039824.1	rpap1-203	4121	1338aa	ENSCLMP00005038351.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C3G6L8	-
ENSCLMT00005039827.1	rpap1-204	3812	1235aa	ENSCLMP00005038354.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C3A6V4	-

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Summary

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