Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SYNPO ENSCJAG00000020973

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Description

synaptopodin [Source:HGNC Symbol;Acc:HGNC:30672]

Location

Primary_assembly 2: 47,291,649-47,436,385 forward strand.

mCalJac1.pat.X:CM021916.1

About this gene

This gene has 6 transcripts (splice variants), 184 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000145529.1	SYNPO-205	6515	1318aa	ENSCJAP00000094041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3X673	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000118288.1	SYNPO-204	4180	901aa	ENSCJAP00000093217.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3WN79	-
ENSCJAT00000126908.1	SYNPO-202	4123	882aa	ENSCJAP00000083809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7HGK6	-
ENSCJAT00000034744.4	SYNPO-203	3952	825aa	ENSCJAP00000032876.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7CYT5	-
ENSCJAT00000041225.5	SYNPO-201	3156	893aa	ENSCJAP00000039027.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FFC9	-
ENSCJAT00000041208.5	SYNPO-206	2490	717aa	ENSCJAP00000039012.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7FG36	-

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Summary

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