Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CUX1 ENSCJAG00000016076

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Description

cut like homeobox 1 [Source:HGNC Symbol;Acc:HGNC:2557]

Location

Primary_assembly 2: 9,590,344-10,051,781 reverse strand.

mCalJac1.pat.X:CM021916.1

About this gene

This gene has 9 transcripts (splice variants), 199 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000031364.5	CUX1-208	4589	1521aa	ENSCJAP00000029680.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7IP03	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000113043.2	CUX1-206	4533	1510aa	ENSCJAP00000078526.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4WLH3	-
ENSCJAT00000095757.2	CUX1-207	4467	1488aa	ENSCJAP00000078489.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4WLA1	-
ENSCJAT00000089418.2	CUX1-209	4421	1465aa	ENSCJAP00000068080.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4VRE4	-
ENSCJAT00000084946.3	CUX1-202	2060	678aa	ENSCJAP00000055232.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3EFJ9	-
ENSCJAT00000031394.3	CUX1-203	2012	662aa	ENSCJAP00000029709.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7IC53	-
ENSCJAT00000082505.3	CUX1-204	1994	656aa	ENSCJAP00000055932.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8M9I0	-
ENSCJAT00000076056.2	CUX1-205	1922	632aa	ENSCJAP00000065754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8NDJ9	-
ENSCJAT00000074093.2	CUX1-201	1920	639aa	ENSCJAP00000067431.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PN78	-

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Summary

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