Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SOX6 ENSCJAG00000009643

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Description

SRY-box transcription factor 6 [Source:HGNC Symbol;Acc:HGNC:16421]

Location

Primary_assembly 11: 78,613,122-79,310,303 reverse strand.

mCalJac1.pat.X:CM021925.1

About this gene

This gene has 6 transcripts (splice variants), 213 orthologues and 20 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000018787.4	SOX6-202	2568	855aa	ENSCJAP00000017764.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7I7I2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000125759.1	SOX6-204	2684	829aa	ENSCJAP00000084377.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3WJT2	-
ENSCJAT00000135741.1	SOX6-205	2664	801aa	ENSCJAP00000086463.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3W4M2	-
ENSCJAT00000140811.1	SOX6-201	2469	796aa	ENSCJAP00000091063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3X1B1	-
ENSCJAT00000019283.4	SOX6-203	2415	804aa	ENSCJAP00000018250.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7GJY1	-
ENSCJAT00000138611.1	SOX6-206	1383	160aa	ENSCJAP00000079132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3VYD2	-

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Summary

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