Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: SCN1A ENSCJAG00000006343

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Description

sodium voltage-gated channel alpha subunit 1 [Source:HGNC Symbol;Acc:HGNC:10585]

Location

Primary_assembly 6: 60,347,177-60,426,368 forward strand.

mCalJac1.pat.X:CM021920.1

About this gene

This gene has 5 transcripts (splice variants), 139 orthologues and 27 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000078007.3	SCN1A-201	6138	2009aa	ENSCJAP00000053754.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8P258	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000073665.3	SCN1A-202	6105	1998aa	ENSCJAP00000057083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8MBT5	-
ENSCJAT00000079124.3	SCN1A-203	5856	1915aa	ENSCJAP00000057868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8MDE9	-
ENSCJAT00000012348.5	SCN1A-205	5837	1938aa	ENSCJAP00000011705.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7GM75	-
ENSCJAT00000068955.3	SCN1A-204	5781	1890aa	ENSCJAP00000066829.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8NEX6	-

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Summary

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