Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: AFF1 ENSCJAG00000006047

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Description

ALF transcription elongation factor 1 [Source:HGNC Symbol;Acc:HGNC:7135]

Location

Primary_assembly 3: 106,590,408-106,772,934 reverse strand.

mCalJac1.pat.X:CM021917.1

About this gene

This gene has 7 transcripts (splice variants), 208 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000011804.4	AFF1-207	4705	1222aa	ENSCJAP00000011185.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7HX68	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000123556.1	AFF1-206	4755	1209aa	ENSCJAP00000079247.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3ZYE0	-
ENSCJAT00000011781.5	AFF1-203	4648	1215aa	ENSCJAP00000011163.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5K1UYS2	-
ENSCJAT00000080989.3	AFF1-201	4582	1193aa	ENSCJAP00000052860.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8P0Z3	-
ENSCJAT00000139300.1	AFF1-204	4561	1186aa	ENSCJAP00000093229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3WN91	-
ENSCJAT00000095783.2	AFF1-202	4528	1175aa	ENSCJAP00000075394.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F4WCG6	-
ENSCJAT00000126165.1	AFF1-205	4438	1145aa	ENSCJAP00000083753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3W5B8	-

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Summary

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