Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: SATB2 ENSCJAG00000004111

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Description

SATB homeobox 2 [Source:HGNC Symbol;Acc:HGNC:21637]

Location

Primary_assembly 6: 116,669,833-116,965,472 reverse strand.

mCalJac1.pat.X:CM021920.1

About this gene

This gene has 6 transcripts (splice variants), 264 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000140812.1	SATB2-203	3010	733aa	ENSCJAP00000083319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3CZ49	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000131285.1	SATB2-201	3054	684aa	ENSCJAP00000090320.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3X9Z9	-
ENSCJAT00000141682.1	SATB2-204	2854	681aa	ENSCJAP00000082577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3W3D8	-
ENSCJAT00000057126.3	SATB2-205	2656	615aa	ENSCJAP00000046440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7IMM8	-
ENSCJAT00000062932.4	SATB2-206	2470	675aa	ENSCJAP00000046932.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6S562	-
ENSCJAT00000007958.4	SATB2-202	2025	674aa	ENSCJAP00000007531.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6RVP0	-

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Summary

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