Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: CAPN1 ENSCJAG00000002371

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Description

calpain 1 [Source:UniProtKB Gene Name;Acc:F7C609]

Location

Primary_assembly 11: 118,850,111-119,048,780 forward strand.

mCalJac1.pat.X:CM021925.1

About this gene

This gene has 5 transcripts (splice variants), 225 orthologues and 18 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCJAT00000004575.5	CAPN1-204	2273	719aa	ENSCJAP00000004341.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F7C609	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCJAT00000066594.3	CAPN1-205	2850	714aa	ENSCJAP00000059969.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3CDJ6	-
ENSCJAT00000144379.1	CAPN1-202	1308	297aa	ENSCJAP00000083521.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3WME4	-
ENSCJAT00000004873.4	CAPN1-201	888	157aa	ENSCJAP00000004620.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6YM94	-
ENSCJAT00000104213.2	CAPN1-203	866	184aa	ENSCJAP00000075705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3D220	-

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Summary

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