Transcript: ENSCAFT00000016764.5 COL17A1-204

Description

collagen type XVII alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:39462]

Location

About this transcript

This transcript has 54 exons, is annotated with 60 domains and features, is associated with 1558 variant alleles and maps to 10 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000045026.4	COL17A1-207	5703	1597aa	ENSCAFP00000037321.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0TU41 A0A8I3PYM6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000072382.2	COL17A1-201	5407	1547aa	ENSCAFP00000057779.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0TPZ1 A0A8I3SC42	-
ENSCAFT00000089841.2	COL17A1-202	5234	1454aa	ENSCAFP00000062164.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0TE04	-
ENSCAFT00000005111.6	COL17A1-203	5198	1442aa	ENSCAFP00000004737.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8I3PYR5 A0A8P0N645	-
ENSCAFT00000016764.5	COL17A1-204	5168	1432aa	ENSCAFP00000015514.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0NCT3	-
ENSCAFT00000109567.1	COL17A1-205	5132	1420aa	ENSCAFP00000073037.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0TRX8	-
ENSCAFT00000105256.1	COL17A1-206	5123	1417aa	ENSCAFP00000075249.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0TUR0	-

Summary

Statistics

Exons: 54, Coding exons: 54, Transcript length: 5,168 bps, Translation length: 1,432 residues

Version

ENSCAFT00000016764.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.